RNA–Protein interactions for RNA: ENST00000443423.1

NEFMP1-201, Transcript of neurofilament medium pseudogene 1, humanhuman

BASIC

Gene NEFMP1, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP1-201ENST00000443423 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
NEFMP1-201ENST00000443423 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
NEFMP1-201ENST00000443423 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
NEFMP1-201ENST00000443423 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
NEFMP1-201ENST00000443423 FOXD1Q16676 465 aa15.12■□□□□ 0.01
NEFMP1-201ENST00000443423 POTEDQ86YR6 584 aa14.3□□□□□ -0.12
NEFMP1-201ENST00000443423 MSH5O43196 834 aa14.07□□□□□ -0.16
NEFMP1-201ENST00000443423 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
NEFMP1-201ENST00000443423 PIAS4Q8N2W9 510 aaPredicted RBP13.94□□□□□ -0.18
NEFMP1-201ENST00000443423 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
NEFMP1-201ENST00000443423 ADRA2BP18089 450 aa13.9□□□□□ -0.18
NEFMP1-201ENST00000443423 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
NEFMP1-201ENST00000443423 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
NEFMP1-201ENST00000443423 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.41
NEFMP1-201ENST00000443423 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
NEFMP1-201ENST00000443423 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
NEFMP1-201ENST00000443423 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
NEFMP1-201ENST00000443423 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
NEFMP1-201ENST00000443423 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
NEFMP1-201ENST00000443423 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
NEFMP1-201ENST00000443423 RNF216Q9NWF9 866 aaPredicted RBP11.99□□□□□ -0.49
NEFMP1-201ENST00000443423 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
NEFMP1-201ENST00000443423 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
NEFMP1-201ENST00000443423 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
NEFMP1-201ENST00000443423 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
NEFMP1-201ENST00000443423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
NEFMP1-201ENST00000443423 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
NEFMP1-201ENST00000443423 SPINK5Q9NQ38 1064 aaPredicted RBP11.3□□□□□ -0.6
NEFMP1-201ENST00000443423 DSG3P32926 999 aa11.26□□□□□ -0.61
NEFMP1-201ENST00000443423 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
NEFMP1-201ENST00000443423 KCNA4P22459 653 aa11.15□□□□□ -0.62
NEFMP1-201ENST00000443423 CAPN15O75808 1086 aa11.13□□□□□ -0.63
NEFMP1-201ENST00000443423 POTEHQ6S545 545 aa11.1□□□□□ -0.63
NEFMP1-201ENST00000443423 ABCB7O75027 752 aa10.93□□□□□ -0.66
NEFMP1-201ENST00000443423 TRHP20396 242 aaPredicted RBP10.91□□□□□ -0.66
NEFMP1-201ENST00000443423 ZNF219Q9P2Y4 722 aaPredicted RBP10.84□□□□□ -0.67
NEFMP1-201ENST00000443423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.73□□□□□ -0.69
NEFMP1-201ENST00000443423 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
NEFMP1-201ENST00000443423 APLP2Q06481 763 aa10.72□□□□□ -0.69
NEFMP1-201ENST00000443423 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
NEFMP1-201ENST00000443423 POLA2Q14181 598 aa10.61□□□□□ -0.71
NEFMP1-201ENST00000443423 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
NEFMP1-201ENST00000443423 ATF5Q9Y2D1 282 aaPredicted RBP10.57□□□□□ -0.72
NEFMP1-201ENST00000443423 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
NEFMP1-201ENST00000443423 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
NEFMP1-201ENST00000443423 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
NEFMP1-201ENST00000443423 SLC4A1APQ9BWU0 796 aaKnown RBP10.36□□□□□ -0.75
NEFMP1-201ENST00000443423 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
NEFMP1-201ENST00000443423 ZBTB22O15209 634 aa10.34□□□□□ -0.75
NEFMP1-201ENST00000443423 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
NEFMP1-201ENST00000443423 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
NEFMP1-201ENST00000443423 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
NEFMP1-201ENST00000443423 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
NEFMP1-201ENST00000443423 ZBTB12Q9Y330 459 aaPredicted RBP10.23□□□□□ -0.77
NEFMP1-201ENST00000443423 PITPNM1O00562 1244 aa10.22□□□□□ -0.77
NEFMP1-201ENST00000443423 FXR2P51116 673 aaKnown RBP eCLIP10.2□□□□□ -0.78
NEFMP1-201ENST00000443423 EVX2Q03828 476 aa10.15□□□□□ -0.78
NEFMP1-201ENST00000443423 HAX1O00165 279 aa10.06□□□□□ -0.8
NEFMP1-201ENST00000443423 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
NEFMP1-201ENST00000443423 MKRN4PQ13434 485 aaPredicted RBP10.06□□□□□ -0.8
NEFMP1-201ENST00000443423 EHMT2Q96KQ7 1210 aa10.03□□□□□ -0.8
NEFMP1-201ENST00000443423 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
NEFMP1-201ENST00000443423 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
NEFMP1-201ENST00000443423 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
NEFMP1-201ENST00000443423 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
NEFMP1-201ENST00000443423 PRKAR2AP13861 404 aaKnown RBP9.9□□□□□ -0.82
NEFMP1-201ENST00000443423 FBLN2P98095 1184 aa9.88□□□□□ -0.83
NEFMP1-201ENST00000443423 C19orf67A6NJJ6 358 aa9.87□□□□□ -0.83
NEFMP1-201ENST00000443423 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
NEFMP1-201ENST00000443423 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
NEFMP1-201ENST00000443423 CLEC11AQ9Y240 323 aa9.84□□□□□ -0.83
NEFMP1-201ENST00000443423 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
NEFMP1-201ENST00000443423 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
NEFMP1-201ENST00000443423 GABBR2O75899 941 aa9.77□□□□□ -0.85
NEFMP1-201ENST00000443423 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
NEFMP1-201ENST00000443423 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
NEFMP1-201ENST00000443423 PRR29P0C7W0 189 aa9.63□□□□□ -0.87
NEFMP1-201ENST00000443423 LHX8Q68G74 356 aa9.62□□□□□ -0.87
NEFMP1-201ENST00000443423 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
NEFMP1-201ENST00000443423 CD44P16070 742 aaKnown RBP9.55□□□□□ -0.88
NEFMP1-201ENST00000443423 CREBZFQ9NS37 354 aa9.48□□□□□ -0.89
NEFMP1-201ENST00000443423 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
NEFMP1-201ENST00000443423 GALR2O43603 387 aaPredicted RBP9.39□□□□□ -0.91
NEFMP1-201ENST00000443423 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
NEFMP1-201ENST00000443423 ZRANB1Q9UGI0 708 aa9.37□□□□□ -0.91
NEFMP1-201ENST00000443423 MNX1P50219 401 aaPredicted RBP9.36□□□□□ -0.91
NEFMP1-201ENST00000443423 CLCN6P51797 869 aa9.36□□□□□ -0.91
NEFMP1-201ENST00000443423 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
NEFMP1-201ENST00000443423 DCBLD2Q96PD2 775 aa9.31□□□□□ -0.92
NEFMP1-201ENST00000443423 PELP1Q8IZL8 1130 aaKnown RBP9.3□□□□□ -0.92
NEFMP1-201ENST00000443423 SPDYE4A6NLX3 237 aa9.29□□□□□ -0.92
NEFMP1-201ENST00000443423 PHF12Q96QT6 1004 aa9.29□□□□□ -0.92
NEFMP1-201ENST00000443423 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
NEFMP1-201ENST00000443423 POTEJP0CG39 1038 aa9.22□□□□□ -0.93
NEFMP1-201ENST00000443423 PROM2Q8N271 834 aa9.18□□□□□ -0.94
NEFMP1-201ENST00000443423 MS4A3Q96HJ5 214 aa9.16□□□□□ -0.94
NEFMP1-201ENST00000443423 ASTLQ6HA08 431 aaPredicted RBP9.15□□□□□ -0.94
NEFMP1-201ENST00000443423 ATMINO43313 823 aaPredicted RBP9.13□□□□□ -0.95
NEFMP1-201ENST00000443423 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
NEFMP1-201ENST00000443423 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms