Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 SNORA11.6-201ENST00000619030 128 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AL359955.1-201ENST00000455242 3275 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AC007390.2-201ENST00000606229 3803 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 RNA5SP361-201ENST00000362686 118 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 RNU6-626P-201ENST00000363354 107 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 Y_RNA.331-201ENST00000365267 102 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 RNU6-20P-201ENST00000384106 107 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 RNU6-239P-201ENST00000390990 99 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AL133173.1-201ENST00000423458 397 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 WARS2P1-201ENST00000429678 537 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 HMGB3P3-201ENST00000510526 400 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 RNU6-971P-201ENST00000516920 106 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AP002001.1-203ENST00000534002 267 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AC090617.7-201ENST00000623952 126 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 U4.7-201ENST00000638126 106 ntBASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PRDM9Q9NQV7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RNU5B-2P-201ENST00000363036 113 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RNU6-1249P-201ENST00000363237 111 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RNA5SP510-201ENST00000364697 99 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RNU6-741P-201ENST00000383889 107 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RNU6-211P-201ENST00000384047 107 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 UBA52P6-201ENST00000399822 382 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RN7SKP17-201ENST00000411242 351 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 ELOCP19-201ENST00000411919 318 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RPL30P13-201ENST00000418873 348 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AL590399.2-201ENST00000427536 309 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 MTND4LP9-201ENST00000427694 174 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AC011742.1-201ENST00000431448 434 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RPL12P18-201ENST00000437175 325 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AL445665.1-202ENST00000452436 324 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AC004129.2-201ENST00000457229 287 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RN7SL570P-201ENST00000484405 292 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 SNORA70.20-201ENST00000516848 126 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AC024940.3-201ENST00000538551 316 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 KLKP1-201ENST00000595979 403 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 AL109809.4-201ENST00000603520 2185 ntBASIC5.48□□□□□ -1.53
PRDM9Q9NQV7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.47□□□□□ -1.53
PRDM9Q9NQV7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.47□□□□□ -1.53
PRDM9Q9NQV7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PRDM9Q9NQV7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRDM9Q9NQV7 AC135776.4-201ENST00000624300 1904 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms