RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
PTPN22-203ENST00000460620 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
PTPN22-203ENST00000460620 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
PTPN22-203ENST00000460620 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
PTPN22-203ENST00000460620 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
PTPN22-203ENST00000460620 FOXD1Q16676 465 aa16.62■□□□□ 0.25
PTPN22-203ENST00000460620 MSH5O43196 834 aa16.43■□□□□ 0.22
PTPN22-203ENST00000460620 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
PTPN22-203ENST00000460620 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
PTPN22-203ENST00000460620 POTEHQ6S545 545 aa14.38□□□□□ -0.11
PTPN22-203ENST00000460620 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
PTPN22-203ENST00000460620 ADRA2BP18089 450 aa14.01□□□□□ -0.17
PTPN22-203ENST00000460620 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
PTPN22-203ENST00000460620 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
PTPN22-203ENST00000460620 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
PTPN22-203ENST00000460620 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
PTPN22-203ENST00000460620 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
PTPN22-203ENST00000460620 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
PTPN22-203ENST00000460620 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
PTPN22-203ENST00000460620 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
PTPN22-203ENST00000460620 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.38
PTPN22-203ENST00000460620 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
PTPN22-203ENST00000460620 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
PTPN22-203ENST00000460620 DSG3P32926 999 aa12.26□□□□□ -0.45
PTPN22-203ENST00000460620 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
PTPN22-203ENST00000460620 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
PTPN22-203ENST00000460620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN22-203ENST00000460620 CAPN15O75808 1086 aa11.96□□□□□ -0.49
PTPN22-203ENST00000460620 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
PTPN22-203ENST00000460620 LHX8Q68G74 356 aa11.89□□□□□ -0.51
PTPN22-203ENST00000460620 HAX1O00165 279 aa11.78□□□□□ -0.52
PTPN22-203ENST00000460620 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
PTPN22-203ENST00000460620 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.52
PTPN22-203ENST00000460620 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
PTPN22-203ENST00000460620 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
PTPN22-203ENST00000460620 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
PTPN22-203ENST00000460620 ABCB7O75027 752 aa11.44□□□□□ -0.58
PTPN22-203ENST00000460620 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
PTPN22-203ENST00000460620 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
PTPN22-203ENST00000460620 APLP2Q06481 763 aa11.34□□□□□ -0.59
PTPN22-203ENST00000460620 EVX2Q03828 476 aa11.33□□□□□ -0.6
PTPN22-203ENST00000460620 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
PTPN22-203ENST00000460620 POTEMA6NI47 508 aa11.26□□□□□ -0.61
PTPN22-203ENST00000460620 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
PTPN22-203ENST00000460620 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.62
PTPN22-203ENST00000460620 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
PTPN22-203ENST00000460620 GABBR2O75899 941 aa11.13□□□□□ -0.63
PTPN22-203ENST00000460620 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
PTPN22-203ENST00000460620 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
PTPN22-203ENST00000460620 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
PTPN22-203ENST00000460620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
PTPN22-203ENST00000460620 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
PTPN22-203ENST00000460620 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
PTPN22-203ENST00000460620 OTUD5Q96G74 571 aa10.75□□□□□ -0.69
PTPN22-203ENST00000460620 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
PTPN22-203ENST00000460620 CLCN6P51797 869 aa10.66□□□□□ -0.7
PTPN22-203ENST00000460620 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
PTPN22-203ENST00000460620 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
PTPN22-203ENST00000460620 POLA2Q14181 598 aa10.62□□□□□ -0.71
PTPN22-203ENST00000460620 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
PTPN22-203ENST00000460620 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.72
PTPN22-203ENST00000460620 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
PTPN22-203ENST00000460620 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
PTPN22-203ENST00000460620 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
PTPN22-203ENST00000460620 POTEB2H3BUK9 544 aa10.35□□□□□ -0.75
PTPN22-203ENST00000460620 OSCARQ8IYS5 282 aa10.34□□□□□ -0.75
PTPN22-203ENST00000460620 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
PTPN22-203ENST00000460620 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
PTPN22-203ENST00000460620 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
PTPN22-203ENST00000460620 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
PTPN22-203ENST00000460620 CD44P16070 742 aaKnown RBP10.21□□□□□ -0.77
PTPN22-203ENST00000460620 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.78
PTPN22-203ENST00000460620 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
PTPN22-203ENST00000460620 CLEC11AQ9Y240 323 aa10.14□□□□□ -0.79
PTPN22-203ENST00000460620 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
PTPN22-203ENST00000460620 ZNF579Q8NAF0 562 aaKnown RBP10.04□□□□□ -0.8
PTPN22-203ENST00000460620 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
PTPN22-203ENST00000460620 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
PTPN22-203ENST00000460620 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
PTPN22-203ENST00000460620 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
PTPN22-203ENST00000460620 POTEJP0CG39 1038 aa9.92□□□□□ -0.82
PTPN22-203ENST00000460620 METRNQ9UJH8 293 aa9.89□□□□□ -0.83
PTPN22-203ENST00000460620 GALR2O43603 387 aaPredicted RBP9.88□□□□□ -0.83
PTPN22-203ENST00000460620 C7P10643 843 aa9.88□□□□□ -0.83
PTPN22-203ENST00000460620 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
PTPN22-203ENST00000460620 FARP1Q9Y4F1 1045 aaPredicted RBP9.84□□□□□ -0.83
PTPN22-203ENST00000460620 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
PTPN22-203ENST00000460620 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
PTPN22-203ENST00000460620 PRR29P0C7W0 189 aa9.8□□□□□ -0.84
PTPN22-203ENST00000460620 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
PTPN22-203ENST00000460620 ST18O60284 1047 aa9.68□□□□□ -0.86
PTPN22-203ENST00000460620 ASTLQ6HA08 431 aaPredicted RBP9.67□□□□□ -0.86
PTPN22-203ENST00000460620 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
PTPN22-203ENST00000460620 ATMINO43313 823 aaPredicted RBP9.58□□□□□ -0.88
PTPN22-203ENST00000460620 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
PTPN22-203ENST00000460620 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
PTPN22-203ENST00000460620 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
PTPN22-203ENST00000460620 ATF5Q9Y2D1 282 aaPredicted RBP9.47□□□□□ -0.89
PTPN22-203ENST00000460620 FBLN2P98095 1184 aa9.47□□□□□ -0.89
PTPN22-203ENST00000460620 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms