Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN1P18031 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN1P18031 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PTPN1P18031 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN1P18031 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN1P18031 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN1P18031 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PTPN1P18031 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PTPN1P18031 TPTE2P4-201ENST00000258589 1605 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 Y_RNA.301-201ENST00000364990 103 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 Y_RNA.315-201ENST00000365117 102 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN1P18031 RPS26P8-201ENST00000393490 348 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN1P18031 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN1P18031 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN1P18031 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.48□□□□□ -1.69
PTPN1P18031 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN1P18031 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN1P18031 KCTD9P3-201ENST00000434597 1169 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN1P18031 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN1P18031 RNU7-66P-201ENST00000459469 62 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 RPS27AP13-201ENST00000498403 237 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN1P18031 RN7SKP13-201ENST00000515933 244 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN1P18031 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN1P18031 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN1P18031 RN7SL600P-201ENST00000581811 299 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN1P18031 BNIP3P25-201ENST00000596023 559 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AC012669.1-201ENST00000603209 283 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AL592436.1-201ENST00000605135 558 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AL133215.3-201ENST00000609801 448 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AC023043.4-201ENST00000612081 449 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 MIR7154-201ENST00000620673 73 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AL357559.1-201ENST00000622228 274 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 AC121333.1-201ENST00000567488 2709 ntBASIC4.48□□□□□ -1.69
PTPN1P18031 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN1P18031 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTPN1P18031 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN1P18031 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN1P18031 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN1P18031 AC103710.2-202ENST00000641454 2853 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 XIAPP3-201ENST00000312918 795 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 Y_RNA.259-201ENST00000364619 101 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 MIR135A2-201ENST00000384854 100 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 MIR153-1-201ENST00000384914 90 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 CKS1BP5-201ENST00000434172 273 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 HMGB3P11-201ENST00000440127 604 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 IFNWP4-201ENST00000453148 294 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 snoU13.3-201ENST00000459441 104 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 AC004801.2-202ENST00000463559 283 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN1P18031 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN1P18031 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 AC108145.1-201ENST00000503770 153 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 KLHL2P1-201ENST00000508691 521 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 RNU6-1095P-201ENST00000516148 108 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 AC008694.2-201ENST00000517591 306 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN1P18031 AC068446.3-201ENST00000555285 382 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 AC243312.2-201ENST00000623340 601 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 MIR492-201ENST00000638676 116 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN1P18031 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN1P18031 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN1P18031 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN1P18031 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN1P18031 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN1P18031 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN1P18031 NOL8P1-201ENST00000508336 3529 ntBASIC4.47□□□□□ -1.69
PTPN1P18031 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN1P18031 AC087190.4-201ENST00000574616 8334 ntBASIC4.46□□□□□ -1.69
PTPN1P18031 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN1P18031 AL137003.2-201ENST00000606924 2538 ntBASIC4.46□□□□□ -1.69
PTPN1P18031 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN1P18031 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN1P18031 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN1P18031 AC027290.2-201ENST00000623210 18662 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN1P18031 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN1P18031 RNU1-108P-201ENST00000362556 161 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 RNU6-1155P-201ENST00000363554 107 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 Y_RNA.167-201ENST00000363735 109 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTPN1P18031 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms