Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 AC010947.1-201ENST00000623454 693 ntBASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 FITM1-202ENST00000559294 800 ntBASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HRH3Q9Y5N1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 ZNF815P-204ENST00000434898 1737 ntBASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 AC005521.1-201ENST00000393351 872 ntBASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 AL445228.2-201ENST00000605589 952 ntBASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 RCC2P6-201ENST00000526625 1557 ntBASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HRH3Q9Y5N1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 B3GAT3P1-201ENST00000471720 806 ntBASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 AC005363.2-201ENST00000618631 242 ntBASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 LINC01568-207ENST00000641790 1380 ntBASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 KRT8P41-201ENST00000533985 1514 ntBASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms