Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 RBM17P1-201ENST00000453646 1190 ntBASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 AC073195.1-201ENST00000607241 877 ntBASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA4Q9Y5G9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHGA4Q9Y5G9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHGA4Q9Y5G9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA4Q9Y5G9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PCDHGA4Q9Y5G9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA4Q9Y5G9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA4Q9Y5G9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA4Q9Y5G9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 AP006587.1-201ENST00000534129 1502 ntBASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA4Q9Y5G9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 AC104581.1-202ENST00000635932 2618 ntBASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 KRT8P9-201ENST00000558927 1449 ntBASIC18.82■□□□□ 0.6
PCDHGA4Q9Y5G9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 AC005521.1-201ENST00000393351 872 ntBASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms