Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 MCRIP2P1-201ENST00000394346 511 ntBASIC18.07■□□□□ 0.48
AP4S1Q9Y587 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 AC023632.3-201ENST00000521633 145 ntBASIC18.07■□□□□ 0.48
AP4S1Q9Y587 AL031432.3-201ENST00000607698 485 ntBASIC18.07■□□□□ 0.48
AP4S1Q9Y587 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.07■□□□□ 0.48
AP4S1Q9Y587 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 OR6D1P-202ENST00000641007 5290 ntBASIC18.06■□□□□ 0.48
AP4S1Q9Y587 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 AL162412.1-201ENST00000567129 965 ntBASIC18.06■□□□□ 0.48
AP4S1Q9Y587 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 AC105020.6-201ENST00000621523 1217 ntBASIC18.06■□□□□ 0.48
AP4S1Q9Y587 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4S1Q9Y587 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 AC016405.3-201ENST00000607710 860 ntBASIC18.05■□□□□ 0.48
AP4S1Q9Y587 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
AP4S1Q9Y587 AC116351.2-201ENST00000606540 1585 ntBASIC18.04■□□□□ 0.48
AP4S1Q9Y587 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 YBX1P1-201ENST00000445822 960 ntBASIC18.04■□□□□ 0.48
AP4S1Q9Y587 TERF1P5-201ENST00000477545 1207 ntBASIC18.04■□□□□ 0.48
AP4S1Q9Y587 AC100791.3-201ENST00000617619 330 ntBASIC18.04■□□□□ 0.48
AP4S1Q9Y587 SDHAP1-207ENST00000440850 2000 ntBASIC18.04■□□□□ 0.48
AP4S1Q9Y587 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 AC004854.2-201ENST00000608450 1441 ntBASIC18.04■□□□□ 0.48
AP4S1Q9Y587 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
AP4S1Q9Y587 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms