Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 TREX1-205ENST00000625293 1783 ntBASIC19.98■□□□□ 0.79
YIPF1Q9Y548 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 GCSHP2-201ENST00000560971 527 ntBASIC19.97■□□□□ 0.79
YIPF1Q9Y548 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 GPAT2P1-201ENST00000444924 1672 ntBASIC19.97■□□□□ 0.79
YIPF1Q9Y548 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YIPF1Q9Y548 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.96■□□□□ 0.79
YIPF1Q9Y548 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 FAM86EP-206ENST00000510506 987 ntBASIC19.96■□□□□ 0.79
YIPF1Q9Y548 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 AP000550.4-202ENST00000639755 178 ntBASIC19.96■□□□□ 0.79
YIPF1Q9Y548 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YIPF1Q9Y548 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
YIPF1Q9Y548 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 PCED1CP-201ENST00000419887 785 ntBASIC19.94■□□□□ 0.78
YIPF1Q9Y548 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 Z82202.1-201ENST00000623446 1880 ntBASIC19.94■□□□□ 0.78
YIPF1Q9Y548 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YIPF1Q9Y548 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms