Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP20Q9Y2K6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
USP20Q9Y2K6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP20Q9Y2K6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 AL032819.2-201ENST00000624543 2162 ntBASIC20.97■□□□□ 0.95
USP20Q9Y2K6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.97■□□□□ 0.95
USP20Q9Y2K6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 RCN1P1-201ENST00000400413 996 ntBASIC20.97■□□□□ 0.95
USP20Q9Y2K6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 CKBP1-201ENST00000565489 1086 ntBASIC20.97■□□□□ 0.95
USP20Q9Y2K6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP20Q9Y2K6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 TEX21P-204ENST00000641479 1693 ntBASIC20.96■□□□□ 0.95
USP20Q9Y2K6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP20Q9Y2K6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.95■□□□□ 0.94
USP20Q9Y2K6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.95■□□□□ 0.94
USP20Q9Y2K6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.95■□□□□ 0.94
USP20Q9Y2K6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP20Q9Y2K6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms