Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 FAM207BP-201ENST00000447172 505 ntBASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 AP000692.2-201ENST00000608391 879 ntBASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 CKBP1-201ENST00000565489 1086 ntBASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 AP006294.2-201ENST00000641667 209 ntBASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 AC087289.5-201ENST00000586076 3175 ntBASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGC3Q9UN70 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 DGCR10-201ENST00000609839 495 ntBASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC3Q9UN70 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 AC026471.5-201ENST00000615068 467 ntBASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 REXO1L10P-201ENST00000615707 1290 ntBASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 REXO1L12P-201ENST00000622156 912 ntBASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC3Q9UN70 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms