Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD248Q9HCU0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.05■□□□□ 0.8
CD248Q9HCU0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.04■□□□□ 0.8
CD248Q9HCU0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.04■□□□□ 0.8
CD248Q9HCU0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 AC116562.2-201ENST00000507042 360 ntBASIC20.04■□□□□ 0.8
CD248Q9HCU0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.04■□□□□ 0.8
CD248Q9HCU0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CD248Q9HCU0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CD248Q9HCU0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD248Q9HCU0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 AC106820.2-201ENST00000563775 3264 ntBASIC20.03■□□□□ 0.8
CD248Q9HCU0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 AP002982.1-201ENST00000492365 877 ntBASIC20.03■□□□□ 0.8
CD248Q9HCU0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 AC145285.6-201ENST00000604632 637 ntBASIC20.03■□□□□ 0.8
CD248Q9HCU0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 PCDHB18P-201ENST00000524813 2368 ntBASIC20.03■□□□□ 0.8
CD248Q9HCU0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 AC020916.1-201ENST00000587762 1774 ntBASIC20.03■□□□□ 0.8
CD248Q9HCU0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD248Q9HCU0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CD248Q9HCU0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CD248Q9HCU0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD248Q9HCU0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD248Q9HCU0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CD248Q9HCU0 AC005332.7-201ENST00000614046 2005 ntBASIC20.02■□□□□ 0.8
CD248Q9HCU0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CD248Q9HCU0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.02■□□□□ 0.8
CD248Q9HCU0 KSR1P1-201ENST00000446298 240 ntBASIC20.02■□□□□ 0.8
CD248Q9HCU0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD248Q9HCU0 AP000525.1-201ENST00000608286 694 ntBASIC20.02■□□□□ 0.8
CD248Q9HCU0 AL032819.2-201ENST00000624543 2162 ntBASIC20.02■□□□□ 0.8
CD248Q9HCU0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD248Q9HCU0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CD248Q9HCU0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.01■□□□□ 0.79
CD248Q9HCU0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 NOC2LP1-202ENST00000452600 2235 ntBASIC20.01■□□□□ 0.79
CD248Q9HCU0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.01■□□□□ 0.79
CD248Q9HCU0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.01■□□□□ 0.79
CD248Q9HCU0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.01■□□□□ 0.79
CD248Q9HCU0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
CD248Q9HCU0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CD248Q9HCU0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CD248Q9HCU0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD248Q9HCU0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CD248Q9HCU0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CD248Q9HCU0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CD248Q9HCU0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20■□□□□ 0.79
CD248Q9HCU0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20■□□□□ 0.79
CD248Q9HCU0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20■□□□□ 0.79
CD248Q9HCU0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20■□□□□ 0.79
CD248Q9HCU0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20■□□□□ 0.79
CD248Q9HCU0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20■□□□□ 0.79
CD248Q9HCU0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20■□□□□ 0.79
CD248Q9HCU0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20■□□□□ 0.79
CD248Q9HCU0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20■□□□□ 0.79
CD248Q9HCU0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms