Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 KRT18P3-201ENST00000451602 1288 ntBASIC17.81■□□□□ 0.44
CHD8Q9HCK8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 AC116407.3-201ENST00000623905 1129 ntBASIC17.81■□□□□ 0.44
CHD8Q9HCK8 AL035252.4-201ENST00000624174 288 ntBASIC17.81■□□□□ 0.44
CHD8Q9HCK8 FAM215A-202ENST00000632077 792 ntBASIC17.81■□□□□ 0.44
CHD8Q9HCK8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD8Q9HCK8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 MIR770-201ENST00000390219 98 ntBASIC17.79■□□□□ 0.44
CHD8Q9HCK8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 CNN2P11-201ENST00000429351 262 ntBASIC17.79■□□□□ 0.44
CHD8Q9HCK8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.79■□□□□ 0.44
CHD8Q9HCK8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 COX20P2-201ENST00000452636 358 ntBASIC17.78■□□□□ 0.44
CHD8Q9HCK8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.78■□□□□ 0.44
CHD8Q9HCK8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.78■□□□□ 0.44
CHD8Q9HCK8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHD8Q9HCK8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 AL645939.2-201ENST00000427340 991 ntBASIC17.77■□□□□ 0.43
CHD8Q9HCK8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms