Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 AC093827.2-201ENST00000512654 315 ntBASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 PRKY-204ENST00000533551 1019 ntBASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 AL121829.2-201ENST00000620908 328 ntBASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.36■□□□□ 0.53
LIN28AQ9H9Z2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 AL691432.2-201ENST00000607222 2038 ntBASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN28AQ9H9Z2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 AL121906.2-201ENST00000621597 723 ntBASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 TREX1-205ENST00000625293 1783 ntBASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 NOC2LP1-202ENST00000452600 2235 ntBASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN28AQ9H9Z2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 AC009113.1-201ENST00000570267 2443 ntBASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIN28AQ9H9Z2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIN28AQ9H9Z2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LIN28AQ9H9Z2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIN28AQ9H9Z2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.33■□□□□ 0.52
LIN28AQ9H9Z2 UBE2SP1-201ENST00000450587 669 ntBASIC18.33■□□□□ 0.52
LIN28AQ9H9Z2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms