Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 AL355355.2-201ENST00000442321 338 ntBASIC17.71■□□□□ 0.43
UBQLN3Q9H347 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 AL355075.4-201ENST00000554988 638 ntBASIC17.71■□□□□ 0.43
UBQLN3Q9H347 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 CR392000.1-201ENST00000624770 1228 ntBASIC17.71■□□□□ 0.43
UBQLN3Q9H347 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 KRT8P8-201ENST00000434750 1448 ntBASIC17.71■□□□□ 0.43
UBQLN3Q9H347 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN3Q9H347 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
UBQLN3Q9H347 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.71■□□□□ 0.42
UBQLN3Q9H347 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
UBQLN3Q9H347 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.7■□□□□ 0.42
UBQLN3Q9H347 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN3Q9H347 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 BX088651.1-201ENST00000540551 451 ntBASIC17.69■□□□□ 0.42
UBQLN3Q9H347 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 AC026271.3-201ENST00000571884 352 ntBASIC17.69■□□□□ 0.42
UBQLN3Q9H347 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 HLA-A-209ENST00000638375 975 ntBASIC17.69■□□□□ 0.42
UBQLN3Q9H347 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN3Q9H347 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.68■□□□□ 0.42
UBQLN3Q9H347 TSPY15P-201ENST00000457163 923 ntBASIC17.68■□□□□ 0.42
UBQLN3Q9H347 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 AC116562.2-201ENST00000507042 360 ntBASIC17.68■□□□□ 0.42
UBQLN3Q9H347 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms