Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 AL050303.2-201ENST00000619798 666 ntBASIC19.91■□□□□ 0.78
DDX47Q9H0S4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 AP006587.1-201ENST00000534129 1502 ntBASIC19.91■□□□□ 0.78
DDX47Q9H0S4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 YBX1P10-201ENST00000444752 975 ntBASIC19.9■□□□□ 0.78
DDX47Q9H0S4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 AC105036.2-201ENST00000569468 176 ntBASIC19.9■□□□□ 0.78
DDX47Q9H0S4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX47Q9H0S4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
DDX47Q9H0S4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 AF201337.1-201ENST00000520239 748 ntBASIC19.89■□□□□ 0.77
DDX47Q9H0S4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX47Q9H0S4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DDX47Q9H0S4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX47Q9H0S4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms