Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
POLR1EQ9GZS1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR1EQ9GZS1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.39■□□□□ 0.7
POLR1EQ9GZS1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR1EQ9GZS1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.39■□□□□ 0.7
POLR1EQ9GZS1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
POLR1EQ9GZS1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR1EQ9GZS1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 AC008040.2-201ENST00000461049 708 ntBASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 KRT17P2-201ENST00000300992 1314 ntBASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 KRT8P11-201ENST00000409686 1436 ntBASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 IRX1P1-201ENST00000438849 1838 ntBASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 FP475955.4-201ENST00000623131 1990 ntBASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1EQ9GZS1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 AP000692.2-201ENST00000608391 879 ntBASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR1EQ9GZS1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.37■□□□□ 0.69
POLR1EQ9GZS1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 AL161938.1-201ENST00000569833 2180 ntBASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms