Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC090888.3-201ENST00000558917 509 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC087878.1-201ENST00000560709 574 ntTSL 4 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 RARRES2P6-201ENST00000567333 442 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AP005119.2-201ENST00000579735 1105 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AP000919.1-202ENST00000581139 1264 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AL445223.1-201ENST00000595998 1051 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AL022067.1-201ENST00000602426 454 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 MTCYBP22-201ENST00000603788 447 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 BNIP3P31-201ENST00000604515 566 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AL450336.1-201ENST00000605180 586 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC092354.1-201ENST00000606057 376 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC087623.3-201ENST00000607047 1098 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 FP700107.1-201ENST00000615237 1178 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 MIR6722-201ENST00000617286 78 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC079298.2-201ENST00000623885 459 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 TSHZ2-205ENST00000626626 670 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC01358-209ENST00000635072 1114 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AL139823.1-201ENST00000641871 1225 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 AC004812.2-201ENST00000611079 2094 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 SYT6-210ENST00000641643 1587 ntBASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP4-4Q9BYR3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC012158.1-203ENST00000488306 1352 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AL022069.1-201ENST00000568025 1636 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC110792.3-201ENST00000595906 1614 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CIB4-201ENST00000288861 773 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms