Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 INGX-201ENST00000359239 846 ntBASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 MFAP1P1-201ENST00000442257 1255 ntBASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 AC022616.7-201ENST00000525383 220 ntBASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.21■■□□□ 1.31
RPAP1Q9BWH6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
RPAP1Q9BWH6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.2■■□□□ 1.31
RPAP1Q9BWH6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 AC008040.2-201ENST00000461049 708 ntBASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 Z85996.1-201ENST00000494644 937 ntBASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 SLC25A1P4-201ENST00000567977 778 ntBASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 TNXA-203ENST00000507684 2038 ntBASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RPAP1Q9BWH6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 FAM207BP-201ENST00000447172 505 ntBASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RPAP1Q9BWH6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 AC063952.2-201ENST00000498792 1227 ntBASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 AC087388.1-201ENST00000571370 1112 ntBASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 MYC-208ENST00000641036 567 ntBASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPAP1Q9BWH6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms