Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 AC124283.5-201ENST00000624661 1809 ntBASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 AC211429.1-201ENST00000415277 523 ntBASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF4Q9BUZ4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 CROCCP3-202ENST00000420820 1947 ntBASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF4Q9BUZ4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 AC106820.2-201ENST00000563775 3264 ntBASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 NBPF21P-201ENST00000425093 1451 ntBASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 HLA-G-202ENST00000376815 851 ntBASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 HLA-G-203ENST00000376818 1127 ntBASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 KRT16P5-201ENST00000455284 522 ntBASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 LINC01023-201ENST00000606054 436 ntBASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 AC092720.2-201ENST00000602388 1665 ntBASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAF4Q9BUZ4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms