Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC38A3Q99624 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 AL138966.2-201ENST00000621997 464 ntBASIC18.52■□□□□ 0.56
SLC38A3Q99624 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SLC38A3Q99624 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC38A3Q99624 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC38A3Q99624 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 AP003041.3-201ENST00000527151 707 ntBASIC18.51■□□□□ 0.55
SLC38A3Q99624 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 NTF6B-201ENST00000591913 560 ntBASIC18.51■□□□□ 0.55
SLC38A3Q99624 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC38A3Q99624 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC38A3Q99624 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 LINC01238-205ENST00000567549 1107 ntBASIC18.5■□□□□ 0.55
SLC38A3Q99624 AC087388.1-201ENST00000571370 1112 ntBASIC18.5■□□□□ 0.55
SLC38A3Q99624 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC38A3Q99624 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC38A3Q99624 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 SDHAP1-207ENST00000440850 2000 ntBASIC18.49■□□□□ 0.55
SLC38A3Q99624 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 PCDHAC2-203ENST00000615316 3011 ntBASIC18.49■□□□□ 0.55
SLC38A3Q99624 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 AC117947.1-201ENST00000427448 529 ntBASIC18.49■□□□□ 0.55
SLC38A3Q99624 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 COX11P1-201ENST00000489116 835 ntBASIC18.49■□□□□ 0.55
SLC38A3Q99624 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 AC139887.4-201ENST00000607877 719 ntBASIC18.49■□□□□ 0.55
SLC38A3Q99624 AC141257.4-201ENST00000634557 245 ntBASIC18.49■□□□□ 0.55
SLC38A3Q99624 AC136944.6-201ENST00000634818 245 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms