Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AC092667.1-201ENST00000434301 2586 ntBASIC20.3■□□□□ 0.84
ZNF558Q96NG5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AL023284.2-201ENST00000405850 579 ntBASIC20.3■□□□□ 0.84
ZNF558Q96NG5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AC092597.1-201ENST00000487352 616 ntBASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AC024243.1-201ENST00000609234 778 ntBASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF558Q96NG5 AC036111.1-201ENST00000533973 1582 ntBASIC20.29■□□□□ 0.84
ZNF558Q96NG5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 AL691432.3-201ENST00000621860 400 ntBASIC20.29■□□□□ 0.84
ZNF558Q96NG5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 TCF3P1-201ENST00000423021 1937 ntBASIC20.29■□□□□ 0.84
ZNF558Q96NG5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF558Q96NG5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 AC012313.10-201ENST00000623509 926 ntBASIC20.28■□□□□ 0.84
ZNF558Q96NG5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF558Q96NG5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 AC026396.1-201ENST00000419388 421 ntBASIC20.27■□□□□ 0.84
ZNF558Q96NG5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 MCCD1P1-208ENST00000445732 328 ntBASIC20.27■□□□□ 0.84
ZNF558Q96NG5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms