Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 C2orf69P4-201ENST00000565394 541 ntBASIC14.6□□□□□ -0.07
LINC00479Q96M42 CYP2T3P-201ENST00000601990 817 ntBASIC14.6□□□□□ -0.07
LINC00479Q96M42 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00479Q96M42 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00479Q96M42 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 TFP1-202ENST00000475455 1573 ntBASIC14.59□□□□□ -0.07
LINC00479Q96M42 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC00479Q96M42 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00479Q96M42 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00479Q96M42 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC00479Q96M42 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00479Q96M42 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00479Q96M42 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC00479Q96M42 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00479Q96M42 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.58□□□□□ -0.07
LINC00479Q96M42 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.58□□□□□ -0.07
LINC00479Q96M42 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC00479Q96M42 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00479Q96M42 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 AC104417.2-201ENST00000562989 1793 ntBASIC14.58□□□□□ -0.08
LINC00479Q96M42 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 MIR638-201ENST00000385237 100 ntBASIC14.58□□□□□ -0.08
LINC00479Q96M42 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms