Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.2■□□□□ 0.5
ITCHQ96J02 TUBB8P6-201ENST00000436895 1288 ntBASIC18.2■□□□□ 0.5
ITCHQ96J02 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.2■□□□□ 0.5
ITCHQ96J02 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.2■□□□□ 0.5
ITCHQ96J02 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.2■□□□□ 0.5
ITCHQ96J02 AC097658.1-201ENST00000475555 843 ntBASIC18.2■□□□□ 0.5
ITCHQ96J02 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.2■□□□□ 0.5
ITCHQ96J02 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ITCHQ96J02 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.2■□□□□ 0.5
ITCHQ96J02 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
ITCHQ96J02 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.2■□□□□ 0.5
ITCHQ96J02 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.2■□□□□ 0.5
ITCHQ96J02 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ITCHQ96J02 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ITCHQ96J02 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.19■□□□□ 0.5
ITCHQ96J02 AC090340.1-201ENST00000620778 4980 ntBASIC18.19■□□□□ 0.5
ITCHQ96J02 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 FEM1AP3-201ENST00000403722 1741 ntBASIC18.19■□□□□ 0.5
ITCHQ96J02 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.19■□□□□ 0.5
ITCHQ96J02 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
ITCHQ96J02 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.19■□□□□ 0.5
ITCHQ96J02 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ITCHQ96J02 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ITCHQ96J02 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ITCHQ96J02 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
ITCHQ96J02 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 WIZP1-201ENST00000531444 2299 ntBASIC18.18■□□□□ 0.5
ITCHQ96J02 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.18■□□□□ 0.5
ITCHQ96J02 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.18■□□□□ 0.5
ITCHQ96J02 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
ITCHQ96J02 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 PNMA6B-201ENST00000538162 1200 ntBASIC18.18■□□□□ 0.5
ITCHQ96J02 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 AC060766.5-201ENST00000590539 871 ntBASIC18.18■□□□□ 0.5
ITCHQ96J02 AC120498.8-201ENST00000614275 531 ntBASIC18.18■□□□□ 0.5
ITCHQ96J02 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 AL121829.2-201ENST00000620908 328 ntBASIC18.18■□□□□ 0.5
ITCHQ96J02 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.18■□□□□ 0.5
ITCHQ96J02 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITCHQ96J02 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.18■□□□□ 0.5
ITCHQ96J02 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
ITCHQ96J02 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.18■□□□□ 0.5
ITCHQ96J02 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
ITCHQ96J02 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms