Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF31Q96EP0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF31Q96EP0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RNF31Q96EP0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF31Q96EP0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF31Q96EP0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 AL162377.1-201ENST00000618844 1793 ntBASIC18.4■□□□□ 0.54
RNF31Q96EP0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF31Q96EP0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF31Q96EP0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF31Q96EP0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF31Q96EP0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.39■□□□□ 0.54
RNF31Q96EP0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF31Q96EP0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF31Q96EP0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 AP000692.2-201ENST00000608391 879 ntBASIC18.39■□□□□ 0.53
RNF31Q96EP0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF31Q96EP0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF31Q96EP0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 AP005242.2-201ENST00000580065 1175 ntBASIC18.38■□□□□ 0.53
RNF31Q96EP0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF31Q96EP0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF31Q96EP0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF31Q96EP0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF31Q96EP0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF31Q96EP0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF31Q96EP0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF31Q96EP0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF31Q96EP0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF31Q96EP0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF31Q96EP0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF31Q96EP0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF31Q96EP0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF31Q96EP0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF31Q96EP0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF31Q96EP0 AC087388.1-201ENST00000571370 1112 ntBASIC18.37■□□□□ 0.53
RNF31Q96EP0 AL590326.2-201ENST00000625139 305 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms