Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 YBX1P10-201ENST00000444752 975 ntBASIC18.18■□□□□ 0.5
LRRC58Q96CX6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 AC133552.2-202ENST00000575694 574 ntBASIC18.18■□□□□ 0.5
LRRC58Q96CX6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 AC083906.6-201ENST00000641366 219 ntBASIC18.18■□□□□ 0.5
LRRC58Q96CX6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 AP006587.1-201ENST00000534129 1502 ntBASIC18.18■□□□□ 0.5
LRRC58Q96CX6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC58Q96CX6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC58Q96CX6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 AC068880.1-201ENST00000507289 2297 ntBASIC18.16■□□□□ 0.5
LRRC58Q96CX6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 RPS2P52-201ENST00000469610 820 ntBASIC18.16■□□□□ 0.5
LRRC58Q96CX6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC58Q96CX6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms