Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SH3KBP1Q96B97 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 MIR1238-201ENST00000408483 83 ntBASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 AC004980.1-204ENST00000429707 299 ntBASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 AP000525.1-201ENST00000608286 694 ntBASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3KBP1Q96B97 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 AC079598.2-202ENST00000546624 1451 ntBASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 FITM1-202ENST00000559294 800 ntBASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3KBP1Q96B97 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 AC012306.2-201ENST00000609350 630 ntBASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 HLA-A-209ENST00000638375 975 ntBASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3KBP1Q96B97 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SH3KBP1Q96B97 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SH3KBP1Q96B97 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.89■□□□□ 0.62
SH3KBP1Q96B97 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SH3KBP1Q96B97 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SH3KBP1Q96B97 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 FAM210CP-201ENST00000445714 574 ntBASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 B3GAT3P1-201ENST00000471720 806 ntBASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 NAPSB-206ENST00000562112 1266 ntBASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SH3KBP1Q96B97 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3KBP1Q96B97 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms