Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
NPIPB3Q92617 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 FP475955.4-201ENST00000623131 1990 ntBASIC15.08■□□□□ 0
NPIPB3Q92617 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NPIPB3Q92617 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.08■□□□□ 0
NPIPB3Q92617 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.08■□□□□ 0
NPIPB3Q92617 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 AC097658.1-201ENST00000475555 843 ntBASIC15.08■□□□□ 0
NPIPB3Q92617 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.08■□□□□ 0
NPIPB3Q92617 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB3Q92617 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB3Q92617 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB3Q92617 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
NPIPB3Q92617 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.07■□□□□ 0
NPIPB3Q92617 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
NPIPB3Q92617 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
NPIPB3Q92617 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB3Q92617 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.07■□□□□ 0
NPIPB3Q92617 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.07■□□□□ 0
NPIPB3Q92617 MIR4758-201ENST00000577688 71 ntBASIC15.07■□□□□ 0
NPIPB3Q92617 HLA-B-256ENST00000639848 1089 ntBASIC15.07■□□□□ 0
NPIPB3Q92617 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NPIPB3Q92617 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
NPIPB3Q92617 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.07■□□□□ 0
NPIPB3Q92617 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NPIPB3Q92617 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NPIPB3Q92617 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB3Q92617 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.07■□□□□ 0
NPIPB3Q92617 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPB3Q92617 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.06■□□□□ 0
NPIPB3Q92617 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.06■□□□□ 0
NPIPB3Q92617 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.06■□□□□ 0
NPIPB3Q92617 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.06■□□□□ 0
NPIPB3Q92617 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB3Q92617 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms