Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 AL354811.1-201ENST00000610286 706 ntBASIC14.3□□□□□ -0.12
NUP35Q8NFH5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 AC135279.3-201ENST00000610945 1311 ntBASIC14.3□□□□□ -0.12
NUP35Q8NFH5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP35Q8NFH5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 LINC00896-202ENST00000609602 2128 ntBASIC14.29□□□□□ -0.12
NUP35Q8NFH5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 IRS3P-201ENST00000223076 1006 ntBASIC14.29□□□□□ -0.12
NUP35Q8NFH5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 SLC7A5P1-201ENST00000568957 537 ntBASIC14.29□□□□□ -0.12
NUP35Q8NFH5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 AL162741.1-201ENST00000565563 1558 ntBASIC14.29□□□□□ -0.12
NUP35Q8NFH5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP35Q8NFH5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 AC126763.1-201ENST00000552015 2118 ntBASIC14.28□□□□□ -0.12
NUP35Q8NFH5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 AC073592.3-201ENST00000625118 1834 ntBASIC14.28□□□□□ -0.12
NUP35Q8NFH5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 PKD1P1-201ENST00000458669 6805 ntBASIC14.28□□□□□ -0.12
NUP35Q8NFH5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP35Q8NFH5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NUP35Q8NFH5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NUP35Q8NFH5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.27□□□□□ -0.12
NUP35Q8NFH5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
NUP35Q8NFH5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms