Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC16Q8NEE8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 AC104076.2-201ENST00000448912 469 ntBASIC20.04■□□□□ 0.8
TTC16Q8NEE8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 AC116562.4-202ENST00000641738 218 ntBASIC20.04■□□□□ 0.8
TTC16Q8NEE8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TTC16Q8NEE8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 CCR12P-201ENST00000446203 998 ntBASIC20.03■□□□□ 0.8
TTC16Q8NEE8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 DUX4L26-201ENST00000489078 1255 ntBASIC20.03■□□□□ 0.8
TTC16Q8NEE8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 AC087388.1-201ENST00000571370 1112 ntBASIC20.03■□□□□ 0.8
TTC16Q8NEE8 NTF6B-201ENST00000591913 560 ntBASIC20.03■□□□□ 0.8
TTC16Q8NEE8 FAM87A-204ENST00000613235 858 ntBASIC20.03■□□□□ 0.8
TTC16Q8NEE8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 AC009237.14-201ENST00000609975 1594 ntBASIC20.03■□□□□ 0.8
TTC16Q8NEE8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TTC16Q8NEE8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.02■□□□□ 0.8
TTC16Q8NEE8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC16Q8NEE8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC16Q8NEE8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC16Q8NEE8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.02■□□□□ 0.79
TTC16Q8NEE8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.02■□□□□ 0.79
TTC16Q8NEE8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC16Q8NEE8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.02■□□□□ 0.79
TTC16Q8NEE8 AC073508.3-201ENST00000619697 1419 ntBASIC20.02■□□□□ 0.79
TTC16Q8NEE8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC16Q8NEE8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC16Q8NEE8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC16Q8NEE8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.01■□□□□ 0.79
TTC16Q8NEE8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC16Q8NEE8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.01■□□□□ 0.79
TTC16Q8NEE8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC16Q8NEE8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms