Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF248Q8NDW4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF248Q8NDW4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF248Q8NDW4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF248Q8NDW4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ZNF248Q8NDW4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF248Q8NDW4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 ATP5G2P1-201ENST00000433580 426 ntBASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 AC112907.2-201ENST00000448639 330 ntBASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 Z85996.1-201ENST00000494644 937 ntBASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 PHGDH-210ENST00000641115 1638 ntBASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF248Q8NDW4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 DPP3P2-201ENST00000416030 1696 ntBASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 AC012313.10-201ENST00000623509 926 ntBASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF248Q8NDW4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF248Q8NDW4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF248Q8NDW4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF248Q8NDW4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms