Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 AL031985.4-201ENST00000642138 673 ntBASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 AC026271.3-201ENST00000571884 352 ntBASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TMEM35BQ8NCS4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 TMEM191A-211ENST00000637163 1067 ntBASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TMEM35BQ8NCS4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 AC004951.3-201ENST00000418645 1148 ntBASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 TNXA-203ENST00000507684 2038 ntBASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TMEM35BQ8NCS4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms