Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AL512604.3-201ENST00000569583 964 ntBASIC20.8■□□□□ 0.92
RNF169Q8NCN4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF169Q8NCN4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 KRT8P45-201ENST00000414328 1447 ntBASIC20.79■□□□□ 0.92
RNF169Q8NCN4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.79■□□□□ 0.92
RNF169Q8NCN4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 AC073130.3-201ENST00000624389 2278 ntBASIC20.79■□□□□ 0.92
RNF169Q8NCN4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF169Q8NCN4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.78■□□□□ 0.92
RNF169Q8NCN4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 FAM8A6P-201ENST00000407496 1135 ntBASIC20.78■□□□□ 0.92
RNF169Q8NCN4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 AL359075.1-203ENST00000462729 1002 ntBASIC20.78■□□□□ 0.92
RNF169Q8NCN4 PRSS44-201ENST00000515154 1146 ntBASIC20.78■□□□□ 0.92
RNF169Q8NCN4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF169Q8NCN4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.77■□□□□ 0.92
RNF169Q8NCN4 UPK3BP1-201ENST00000428678 509 ntBASIC20.77■□□□□ 0.92
RNF169Q8NCN4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF169Q8NCN4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF169Q8NCN4 AC104417.2-201ENST00000562989 1793 ntBASIC20.77■□□□□ 0.91
RNF169Q8NCN4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF169Q8NCN4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF169Q8NCN4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms