Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 AP000974.1-201ENST00000623909 2387 ntBASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 AL353807.1-201ENST00000427475 662 ntBASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 TSPY21P-201ENST00000433481 731 ntBASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 HTR7P1-201ENST00000538670 1336 ntBASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC9CQ8N5M4 AL161938.1-201ENST00000569833 2180 ntBASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 NIFKP9-201ENST00000419265 221 ntBASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 AP002982.1-201ENST00000492365 877 ntBASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 AL359736.2-201ENST00000621992 437 ntBASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 FAM197Y4-202ENST00000622692 608 ntBASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 AC131212.4-201ENST00000623606 975 ntBASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 FP475955.4-201ENST00000623131 1990 ntBASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TTC9CQ8N5M4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.08■□□□□ 0.01
TTC9CQ8N5M4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 RARRES2P10-201ENST00000564312 460 ntBASIC15.08■□□□□ 0
TTC9CQ8N5M4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 FEM1AP3-201ENST00000403722 1741 ntBASIC15.08■□□□□ 0
TTC9CQ8N5M4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms