Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNPOQ8N3V7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPOQ8N3V7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SYNPOQ8N3V7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SYNPOQ8N3V7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 AC009237.14-201ENST00000609975 1594 ntBASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPOQ8N3V7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYNPOQ8N3V7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYNPOQ8N3V7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPOQ8N3V7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPOQ8N3V7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SYNPOQ8N3V7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SYNPOQ8N3V7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.39■□□□□ 0.69
SYNPOQ8N3V7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms