Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 AC104581.1-202ENST00000635932 2618 ntBASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DEPDC4Q8N2C3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DEPDC4Q8N2C3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 MYC-209ENST00000641252 345 ntBASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 Z98044.1-201ENST00000632503 1764 ntBASIC17.74■□□□□ 0.43
DEPDC4Q8N2C3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms