Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.68■■□□□ 1.38
SMC5Q8IY18 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.68■■□□□ 1.38
SMC5Q8IY18 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SMC5Q8IY18 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.68■■□□□ 1.38
SMC5Q8IY18 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SMC5Q8IY18 WIZP1-201ENST00000531444 2299 ntBASIC23.68■■□□□ 1.38
SMC5Q8IY18 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 NIFKP9-201ENST00000419265 221 ntBASIC23.67■■□□□ 1.38
SMC5Q8IY18 AC004980.1-204ENST00000429707 299 ntBASIC23.67■■□□□ 1.38
SMC5Q8IY18 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SMC5Q8IY18 AC128676.1-201ENST00000454392 318 ntBASIC23.67■■□□□ 1.38
SMC5Q8IY18 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.67■■□□□ 1.38
SMC5Q8IY18 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.67■■□□□ 1.38
SMC5Q8IY18 AL353708.3-201ENST00000610272 989 ntBASIC23.67■■□□□ 1.38
SMC5Q8IY18 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.67■■□□□ 1.38
SMC5Q8IY18 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SMC5Q8IY18 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.67■■□□□ 1.38
SMC5Q8IY18 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SMC5Q8IY18 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC5Q8IY18 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 AC104581.1-202ENST00000635932 2618 ntBASIC23.66■■□□□ 1.38
SMC5Q8IY18 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.66■■□□□ 1.38
SMC5Q8IY18 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC5Q8IY18 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.65■■□□□ 1.38
SMC5Q8IY18 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 KRT8P11-201ENST00000409686 1436 ntBASIC23.65■■□□□ 1.38
SMC5Q8IY18 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC5Q8IY18 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
SMC5Q8IY18 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.64■■□□□ 1.38
SMC5Q8IY18 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMC5Q8IY18 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMC5Q8IY18 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SMC5Q8IY18 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SMC5Q8IY18 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMC5Q8IY18 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.64■■□□□ 1.38
SMC5Q8IY18 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.64■■□□□ 1.38
SMC5Q8IY18 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SMC5Q8IY18 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms