Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 ZNF815P-204ENST00000434898 1737 ntBASIC27.23■■□□□ 1.95
UBR1Q8IWV7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 SAPCD2P3-201ENST00000455031 850 ntBASIC27.23■■□□□ 1.95
UBR1Q8IWV7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 NME4-212ENST00000621774 904 ntTSL 3 BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC27.23■■□□□ 1.95
UBR1Q8IWV7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 AL353801.3-201ENST00000609898 542 ntBASIC27.22■■□□□ 1.95
UBR1Q8IWV7 REXO1L6P-202ENST00000619970 1078 ntBASIC27.22■■□□□ 1.95
UBR1Q8IWV7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
UBR1Q8IWV7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 TK1-205ENST00000590862 642 ntTSL 3 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 AC099336.1-202ENST00000602961 463 ntBASIC27.21■■□□□ 1.95
UBR1Q8IWV7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 AC012676.1-201ENST00000574705 1949 ntBASIC27.21■■□□□ 1.95
UBR1Q8IWV7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 AC079776.4-201ENST00000511039 504 ntBASIC27.21■■□□□ 1.95
UBR1Q8IWV7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
UBR1Q8IWV7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
UBR1Q8IWV7 Z83836.1-201ENST00000624605 1642 ntBASIC27.2■■□□□ 1.95
UBR1Q8IWV7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC27.2■■□□□ 1.95
UBR1Q8IWV7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
UBR1Q8IWV7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
UBR1Q8IWV7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
UBR1Q8IWV7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC27.2■■□□□ 1.95
UBR1Q8IWV7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
UBR1Q8IWV7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 GRAMD4P1-201ENST00000435181 1110 ntBASIC27.2■■□□□ 1.94
UBR1Q8IWV7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
UBR1Q8IWV7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 SLC25A1P1-201ENST00000528351 927 ntBASIC27.19■■□□□ 1.94
UBR1Q8IWV7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC27.19■■□□□ 1.94
UBR1Q8IWV7 GPR32P1-201ENST00000601788 811 ntBASIC27.19■■□□□ 1.94
UBR1Q8IWV7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
UBR1Q8IWV7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC27.18■■□□□ 1.94
UBR1Q8IWV7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
UBR1Q8IWV7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms