Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 AC073130.3-201ENST00000624389 2278 ntBASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 TSPY17P-201ENST00000450329 467 ntBASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 HMGA1P5-201ENST00000412453 271 ntBASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 TSPY23P-201ENST00000440136 739 ntBASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 AL023803.3-201ENST00000615559 522 ntBASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 AC092338.2-201ENST00000568827 1415 ntBASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 AC073508.3-201ENST00000619697 1419 ntBASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCN4BQ8IWT1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 CA15P1-201ENST00000481698 905 ntBASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 AL353719.1-201ENST00000566847 864 ntBASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN4BQ8IWT1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
SCN4BQ8IWT1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 Z82202.1-201ENST00000623446 1880 ntBASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN4BQ8IWT1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms