Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 AL023875.1-201ENST00000640777 796 ntBASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 FP475955.4-201ENST00000623131 1990 ntBASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00346Q8IVM7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 CROCCP3-202ENST00000420820 1947 ntBASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 ESRRAP1-201ENST00000400596 1257 ntBASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 KRASP1-201ENST00000407852 552 ntBASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 AC004264.1-201ENST00000608354 794 ntBASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00346Q8IVM7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LINC00346Q8IVM7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.89■□□□□ 0.3
LINC00346Q8IVM7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 AC239809.2-201ENST00000415381 517 ntBASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 C1QL1P1-201ENST00000568105 661 ntBASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 HLA-A-209ENST00000638375 975 ntBASIC16.89■□□□□ 0.29
LINC00346Q8IVM7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms