Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 BX119927.1-201ENST00000636596 1552 ntBASIC18.23■□□□□ 0.51
RAB43Q86YS6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 CRYGFP-201ENST00000418459 633 ntBASIC18.23■□□□□ 0.51
RAB43Q86YS6 AC011506.1-201ENST00000474329 610 ntBASIC18.23■□□□□ 0.51
RAB43Q86YS6 AC128688.1-201ENST00000487626 519 ntBASIC18.23■□□□□ 0.51
RAB43Q86YS6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 AL590326.2-201ENST00000625139 305 ntBASIC18.23■□□□□ 0.51
RAB43Q86YS6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB43Q86YS6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RAB43Q86YS6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 LIN28AP1-201ENST00000429574 405 ntBASIC18.22■□□□□ 0.51
RAB43Q86YS6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 EGLN1P1-201ENST00000531623 762 ntBASIC18.22■□□□□ 0.51
RAB43Q86YS6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 AC011298.2-201ENST00000617989 482 ntBASIC18.22■□□□□ 0.51
RAB43Q86YS6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 TMEM179-206ENST00000616017 1645 ntBASIC18.22■□□□□ 0.51
RAB43Q86YS6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB43Q86YS6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 TNXA-203ENST00000507684 2038 ntBASIC18.22■□□□□ 0.51
RAB43Q86YS6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB43Q86YS6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 AP001271.2-201ENST00000624018 1556 ntBASIC18.21■□□□□ 0.51
RAB43Q86YS6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 TERF1P1-201ENST00000311003 1181 ntBASIC18.21■□□□□ 0.51
RAB43Q86YS6 AC004951.3-201ENST00000418645 1148 ntBASIC18.21■□□□□ 0.51
RAB43Q86YS6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 KRT18P57-201ENST00000443599 1254 ntBASIC18.21■□□□□ 0.51
RAB43Q86YS6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 SLC25A1P4-201ENST00000567977 778 ntBASIC18.21■□□□□ 0.51
RAB43Q86YS6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 HLA-A-209ENST00000638375 975 ntBASIC18.21■□□□□ 0.51
RAB43Q86YS6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms