Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD3Q7Z407 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 AC092667.1-201ENST00000434301 2586 ntBASIC13.3□□□□□ -0.28
CSMD3Q7Z407 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 KRT18P13-201ENST00000400056 1290 ntBASIC13.3□□□□□ -0.28
CSMD3Q7Z407 DRAXINP1-201ENST00000437611 948 ntBASIC13.3□□□□□ -0.28
CSMD3Q7Z407 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 AL157888.1-201ENST00000631930 593 ntBASIC13.3□□□□□ -0.28
CSMD3Q7Z407 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 SAPCD2P3-201ENST00000455031 850 ntBASIC13.3□□□□□ -0.28
CSMD3Q7Z407 FOSL1P1-201ENST00000511041 816 ntBASIC13.3□□□□□ -0.28
CSMD3Q7Z407 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 AC104417.2-201ENST00000562989 1793 ntBASIC13.3□□□□□ -0.28
CSMD3Q7Z407 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD3Q7Z407 KRT16P6-202ENST00000425692 1426 ntBASIC13.29□□□□□ -0.28
CSMD3Q7Z407 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 AC117500.6-201ENST00000624871 588 ntBASIC13.29□□□□□ -0.28
CSMD3Q7Z407 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD3Q7Z407 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 AC022898.2-201ENST00000616822 1312 ntBASIC13.28□□□□□ -0.28
CSMD3Q7Z407 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.28□□□□□ -0.28
CSMD3Q7Z407 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 AF228730.7-201ENST00000641842 219 ntBASIC13.28□□□□□ -0.28
CSMD3Q7Z407 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 AL121672.3-201ENST00000608644 468 ntBASIC13.28□□□□□ -0.28
CSMD3Q7Z407 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.28□□□□□ -0.28
CSMD3Q7Z407 AC079602.3-201ENST00000623931 403 ntBASIC13.28□□□□□ -0.28
CSMD3Q7Z407 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms