Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 AL050303.2-201ENST00000619798 666 ntBASIC17.27■□□□□ 0.36
SHFQ7M4L6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.27■□□□□ 0.36
SHFQ7M4L6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHFQ7M4L6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHFQ7M4L6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHFQ7M4L6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHFQ7M4L6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHFQ7M4L6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SHFQ7M4L6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHFQ7M4L6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SHFQ7M4L6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHFQ7M4L6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 MIR663A-201ENST00000385250 93 ntBASIC17.26■□□□□ 0.35
SHFQ7M4L6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHFQ7M4L6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 AL512353.2-201ENST00000448759 1962 ntBASIC17.26■□□□□ 0.35
SHFQ7M4L6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHFQ7M4L6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHFQ7M4L6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHFQ7M4L6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms