Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 AP003097.1-201ENST00000530657 1135 ntBASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 AC004264.1-201ENST00000608354 794 ntBASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 LETM1P2-201ENST00000597330 2178 ntBASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST3H2AQ7L7L0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 TNXA-203ENST00000507684 2038 ntBASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 NBPF21P-201ENST00000425093 1451 ntBASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 AC141586.3-201ENST00000562166 1838 ntBASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
HIST3H2AQ7L7L0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 AC104417.2-201ENST00000562989 1793 ntBASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2AQ7L7L0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms