Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 AC116562.2-201ENST00000507042 360 ntBASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 AC011298.2-201ENST00000617989 482 ntBASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 AL049637.2-201ENST00000641778 930 ntBASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 FSCN1P1-201ENST00000568912 1481 ntBASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.46■□□□□ 0.23
COLCA1Q6ZS62 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COLCA1Q6ZS62 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
COLCA1Q6ZS62 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.46■□□□□ 0.22
COLCA1Q6ZS62 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 CROCCP3-202ENST00000420820 1947 ntBASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 AC113410.3-201ENST00000623366 203 ntBASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.45■□□□□ 0.22
COLCA1Q6ZS62 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 NUDT16P1-203ENST00000513809 620 ntBASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 Z99916.2-201ENST00000604037 246 ntBASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 AP000692.2-201ENST00000608391 879 ntBASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.44■□□□□ 0.22
COLCA1Q6ZS62 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms