Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 AL136116.3-201ENST00000402907 1138 ntBASIC12.12□□□□□ -0.47
LINC00575Q6W349 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 AC008764.6-201ENST00000595909 2069 ntBASIC12.12□□□□□ -0.47
LINC00575Q6W349 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00575Q6W349 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 AL356441.2-201ENST00000443009 864 ntBASIC12.11□□□□□ -0.47
LINC00575Q6W349 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 GRAMD4P4-201ENST00000613563 1115 ntBASIC12.11□□□□□ -0.47
LINC00575Q6W349 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 AC139713.2-201ENST00000641328 2723 ntBASIC12.11□□□□□ -0.47
LINC00575Q6W349 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 AC019069.1-201ENST00000610008 1333 ntBASIC12.11□□□□□ -0.47
LINC00575Q6W349 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00575Q6W349 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00575Q6W349 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 RASA4CP-201ENST00000424092 1398 ntBASIC12.1□□□□□ -0.47
LINC00575Q6W349 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC00575Q6W349 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00575Q6W349 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms