Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PACS1Q6VY07 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PACS1Q6VY07 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.31■□□□□ 0.68
PACS1Q6VY07 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PACS1Q6VY07 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PACS1Q6VY07 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.31■□□□□ 0.68
PACS1Q6VY07 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.31■□□□□ 0.68
PACS1Q6VY07 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS1Q6VY07 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 FP475955.4-201ENST00000623131 1990 ntBASIC19.3■□□□□ 0.68
PACS1Q6VY07 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 AC004264.1-201ENST00000608354 794 ntBASIC19.3■□□□□ 0.68
PACS1Q6VY07 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PACS1Q6VY07 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PACS1Q6VY07 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 KRASP1-201ENST00000407852 552 ntBASIC19.29■□□□□ 0.68
PACS1Q6VY07 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.29■□□□□ 0.68
PACS1Q6VY07 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACS1Q6VY07 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 KRT18P29-201ENST00000397031 1267 ntBASIC19.28■□□□□ 0.68
PACS1Q6VY07 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.28■□□□□ 0.68
PACS1Q6VY07 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms