Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 ANO7L1-203ENST00000602586 1720 ntBASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 LSM12P1-201ENST00000411836 588 ntBASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 AC007322.1-201ENST00000426983 750 ntBASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 AC093787.1-201ENST00000450396 207 ntBASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00242Q5T6M2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 AC068880.1-201ENST00000507289 2297 ntBASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 KRT8P8-201ENST00000434750 1448 ntBASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 AC073210.2-201ENST00000430369 194 ntBASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00242Q5T6M2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms