Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 AC079781.5-201ENST00000641390 3211 nt17.44■□□□□ 0.381e-5■□□□□ 10.6
LSM11P83369 MCRIP2-210ENST00000620462 1594 ntTSL 517.27■□□□□ 0.351e-5■□□□□ 10.6
LSM11P83369 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.321e-5■□□□□ 10.6
LSM11P83369 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.03■□□□□ 0.321e-5■□□□□ 10.6
LSM11P83369 AC079781.5-203ENST00000641315 2059 nt16.93■□□□□ 0.31e-5■□□□□ 10.6
LSM11P83369 MCRIP2-204ENST00000575894 1728 nt16.93■□□□□ 0.31e-5■□□□□ 10.6
LSM11P83369 MCRIP2-209ENST00000619674 2306 ntTSL 216.6■□□□□ 0.251e-5■□□□□ 10.6
LSM11P83369 CDC37-210ENST00000593124 1389 ntTSL 516.51■□□□□ 0.231e-10■□□□□ 10.6
LSM11P83369 MCRIP2-206ENST00000615744 1379 ntTSL 316.51■□□□□ 0.231e-5■□□□□ 10.6
LSM11P83369 GAK-217ENST00000511980 1768 ntTSL 516.25■□□□□ 0.191e-5■□□□□ 10.6
LSM11P83369 TPM1-228ENST00000560975 2855 ntTSL 515.66■□□□□ 0.14e-12■□□□□ 10.6
LSM11P83369 SSUH2-216ENST00000495366 2386 ntTSL 215.41■□□□□ 0.061e-5■□□□□ 10.6
LSM11P83369 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.051e-5■□□□□ 10.6
LSM11P83369 CDC37-202ENST00000588498 690 ntTSL 315.02■□□□□ -01e-10■□□□□ 10.6
LSM11P83369 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.011e-5■□□□□ 10.6
LSM11P83369 FOXRED1-207ENST00000527004 1760 ntTSL 514.72□□□□□ -0.051e-5■□□□□ 10.6
LSM11P83369 GAK-205ENST00000504668 929 ntTSL 314.65□□□□□ -0.061e-5■□□□□ 10.6
LSM11P83369 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.091e-5■□□□□ 10.6
LSM11P83369 CDC37-203ENST00000588869 966 ntTSL 514.48□□□□□ -0.091e-10■□□□□ 10.6
LSM11P83369 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.131e-5■□□□□ 10.6
LSM11P83369 AC079781.5-202ENST00000641784 3743 ntBASIC13.82□□□□□ -0.21e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-218ENST00000494117 2358 ntTSL 213.8□□□□□ -0.21e-5■□□□□ 10.6
LSM11P83369 GAK-211ENST00000509566 3126 ntTSL 213.74□□□□□ -0.211e-5■□□□□ 10.6
LSM11P83369 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.221e-10■□□□□ 10.6
LSM11P83369 RAB11FIP3-208ENST00000464263 329 ntTSL 313.61□□□□□ -0.231e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.251e-5■□□□□ 10.6
LSM11P83369 CDC37-209ENST00000591248 1377 ntTSL 513.43□□□□□ -0.261e-10■□□□□ 10.6
LSM11P83369 MCRIP2-205ENST00000611328 628 ntTSL 313.37□□□□□ -0.271e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.271e-5■□□□□ 10.6
LSM11P83369 CDC37-206ENST00000589629 728 ntTSL 313.13□□□□□ -0.311e-10■□□□□ 10.6
LSM11P83369 FOXRED1-217ENST00000534011 1955 ntTSL 213.05□□□□□ -0.321e-5■□□□□ 10.6
LSM11P83369 MCM3AP-204ENST00000467026 2671 ntTSL 1 (best)12.82□□□□□ -0.361e-5■□□□□ 10.6
LSM11P83369 FOXRED1-218ENST00000534315 2210 ntTSL 1 (best)12.78□□□□□ -0.361e-5■□□□□ 10.6
LSM11P83369 GAK-216ENST00000511345 3567 ntTSL 212.74□□□□□ -0.371e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.381e-5■□□□□ 10.6
LSM11P83369 SSUH2-203ENST00000413305 1874 ntTSL 1 (best)12.28□□□□□ -0.441e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.471e-5■□□□□ 10.6
LSM11P83369 SSUH2-207ENST00000435138 2632 ntTSL 211.86□□□□□ -0.511e-5■□□□□ 10.6
LSM11P83369 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.561e-5■□□□□ 10.6
LSM11P83369 GAK-221ENST00000515868 3903 ntTSL 211.45□□□□□ -0.581e-5■□□□□ 10.6
LSM11P83369 TPM1-209ENST00000558072 525 ntTSL 211.11□□□□□ -0.634e-12■□□□□ 10.6
LSM11P83369 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.671e-5■□□□□ 10.6
LSM11P83369 SSUH2-208ENST00000455157 3219 ntTSL 210.7□□□□□ -0.71e-5■□□□□ 10.6
LSM11P83369 MCM3AP-207ENST00000486937 4593 ntTSL 210.4□□□□□ -0.741e-5■□□□□ 10.6
LSM11P83369 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.81e-5■□□□□ 10.6
LSM11P83369 ZNF266-205ENST00000591213 760 ntTSL 1 (best)10.03□□□□□ -0.81e-5■□□□□ 10.6
LSM11P83369 METTL17-219ENST00000555902 868 ntTSL 39.67□□□□□ -0.861e-5■□□□□ 10.6
LSM11P83369 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.881e-5■□□□□ 10.6
LSM11P83369 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.941e-5■□□□□ 10.6
LSM11P83369 MCM3AP-210ENST00000496607 4075 ntTSL 29.09□□□□□ -0.951e-5■□□□□ 10.6
LSM11P83369 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC9.07□□□□□ -0.961e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-205ENST00000422861 4322 ntAPPRIS ALT2 TSL 28.67□□□□□ -1.021e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-213ENST00000471977 318 ntTSL 38.61□□□□□ -1.031e-5■□□□□ 10.6
LSM11P83369 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.15□□□□□ -1.11e-5■□□□□ 10.6
LSM11P83369 FOXRED1-210ENST00000530642 3045 ntTSL 27.93□□□□□ -1.141e-5■□□□□ 10.6
LSM11P83369 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.151e-5■□□□□ 10.6
LSM11P83369 L3MBTL1-201ENST00000373133 3288 ntTSL 1 (best)7.6□□□□□ -1.191e-5■□□□□ 10.6
LSM11P83369 ASNS-213ENST00000454046 1947 ntTSL 57.47□□□□□ -1.211e-5■□□□□ 10.6
LSM11P83369 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.82□□□□□ -1.481e-5■□□□□ 10.6
LSM11P83369 MCEE-205ENST00000494660 836 ntTSL 217.43■□□□□ 0.382e-7■□□□□ 10.6
LSM11P83369 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.055e-14■□□□□ 10.6
LSM11P83369 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.69□□□□□ -0.062e-7■□□□□ 10.6
LSM11P83369 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-7■□□□□ 10.6
LSM11P83369 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.34□□□□□ -0.274e-30■□□□□ 10.6
LSM11P83369 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC12.7□□□□□ -0.382e-7■□□□□ 10.6
LSM11P83369 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.542e-7■□□□□ 10.6
LSM11P83369 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC11□□□□□ -0.652e-7■□□□□ 10.6
LSM11P83369 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.984e-30■□□□□ 10.6
LSM11P83369 MCEE-204ENST00000486135 499 ntTSL 38.77□□□□□ -1.012e-7■□□□□ 10.6
LSM11P83369 snoU2-30.1-201ENST00000365012 70 ntBASIC4.19□□□□□ -1.744e-30■□□□□ 10.6
LSM11P83369 CHKA-203ENST00000525155 1201 ntTSL 510.71□□□□□ -0.691e-6■□□□□ 10.6
LSM11P83369 CHKA-207ENST00000533728 662 ntTSL 28.9□□□□□ -0.981e-6■□□□□ 10.6
LSM11P83369 ATP1B3-204ENST00000466678 1708 ntTSL 312.84□□□□□ -0.353e-6■□□□□ 10.6
LSM11P83369 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.393e-6■□□□□ 10.6
LSM11P83369 ATP1B3-207ENST00000484727 657 ntTSL 210.75□□□□□ -0.693e-6■□□□□ 10.6
LSM11P83369 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC10.25□□□□□ -0.773e-6■□□□□ 10.6
LSM11P83369 ATP1B3-208ENST00000486782 229 ntTSL 29.95□□□□□ -0.823e-6■□□□□ 10.6
LSM11P83369 ATP1B3-203ENST00000465172 1951 ntTSL 28.41□□□□□ -1.063e-6■□□□□ 10.6
LSM11P83369 ATP1B3-209ENST00000487199 421 ntTSL 37.19□□□□□ -1.263e-6■□□□□ 10.6
LSM11P83369 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC11.58□□□□□ -0.563e-69■□□□□ 10.6
LSM11P83369 BRD2-209ENST00000469132 1628 ntTSL 215.44■□□□□ 0.065e-8■□□□□ 10.6
LSM11P83369 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 05e-8■□□□□ 10.6
LSM11P83369 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.225e-8■□□□□ 10.6
LSM11P83369 BRD2-212ENST00000482914 4834 ntTSL 1 (best)12.86□□□□□ -0.355e-8■□□□□ 10.6
LSM11P83369 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)11.43□□□□□ -0.585e-8■□□□□ 10.6
LSM11P83369 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.585e-8■□□□□ 10.6
LSM11P83369 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.965e-8■□□□□ 10.6
LSM11P83369 SUPT5H-216ENST00000599335 3796 ntTSL 210.34□□□□□ -0.753e-6■□□□□ 10.6
LSM11P83369 NPEPL1-209ENST00000533788 899 ntTSL 514.11□□□□□ -0.155e-8■□□□□ 10.6
LSM11P83369 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.655e-11■□□□□ 10.6
LSM11P83369 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.597e-7■□□□□ 10.6
LSM11P83369 FKBP10-204ENST00000464180 1129 ntTSL 218.45■□□□□ 0.547e-27■□□□□ 10.6
LSM11P83369 CHKB-CPT1B-202ENST00000453634 2816 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.738e-8■□□□□ 10.6
LSM11P83369 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.95■□□□□ 0.782e-8■□□□□ 10.6
LSM11P83369 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.452e-8■□□□□ 10.6
LSM11P83369 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.012e-8■□□□□ 10.6
LSM11P83369 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.022e-8■□□□□ 10.6
LSM11P83369 C16orf58-210ENST00000568491 2422 ntTSL 214.11□□□□□ -0.152e-8■□□□□ 10.6
LSM11P83369 RAB24-203ENST00000393610 870 ntTSL 514.78□□□□□ -0.044e-7■□□□□ 10.6
LSM11P83369 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.044e-8■□□□□ 10.6
Retrieved 100 of 11,495 protein–RNA pairs in 53.3 ms