Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMIM11AP58511 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.63■□□□□ 0.41
SMIM11AP58511 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMIM11AP58511 AL512353.2-201ENST00000448759 1962 ntBASIC17.62■□□□□ 0.41
SMIM11AP58511 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM11AP58511 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.62■□□□□ 0.41
SMIM11AP58511 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMIM11AP58511 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMIM11AP58511 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM11AP58511 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.62■□□□□ 0.41
SMIM11AP58511 AC022517.1-201ENST00000592429 346 ntBASIC17.62■□□□□ 0.41
SMIM11AP58511 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SMIM11AP58511 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.62■□□□□ 0.41
SMIM11AP58511 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM11AP58511 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMIM11AP58511 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 AC005082.1-201ENST00000413042 2259 ntBASIC17.61■□□□□ 0.41
SMIM11AP58511 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.61■□□□□ 0.41
SMIM11AP58511 AC009113.1-201ENST00000570267 2443 ntBASIC17.61■□□□□ 0.41
SMIM11AP58511 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SMIM11AP58511 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMIM11AP58511 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SMIM11AP58511 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
SMIM11AP58511 TUBB8P6-201ENST00000436895 1288 ntBASIC17.61■□□□□ 0.41
SMIM11AP58511 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SMIM11AP58511 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.61■□□□□ 0.41
SMIM11AP58511 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.61■□□□□ 0.41
SMIM11AP58511 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.61■□□□□ 0.41
SMIM11AP58511 KRT18P16-201ENST00000510337 1294 ntBASIC17.61■□□□□ 0.41
SMIM11AP58511 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.61■□□□□ 0.41
SMIM11AP58511 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.61■□□□□ 0.41
SMIM11AP58511 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 AC135050.7-201ENST00000624508 2218 ntBASIC17.61■□□□□ 0.41
SMIM11AP58511 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.61■□□□□ 0.41
SMIM11AP58511 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.61■□□□□ 0.41
SMIM11AP58511 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMIM11AP58511 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM11AP58511 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMIM11AP58511 AC124283.5-201ENST00000624661 1809 ntBASIC17.61■□□□□ 0.41
SMIM11AP58511 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SMIM11AP58511 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.6■□□□□ 0.41
SMIM11AP58511 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMIM11AP58511 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.6■□□□□ 0.41
SMIM11AP58511 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 DUSP5P2-201ENST00000426873 1033 ntBASIC17.6■□□□□ 0.41
SMIM11AP58511 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.6■□□□□ 0.41
SMIM11AP58511 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMIM11AP58511 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.6■□□□□ 0.41
SMIM11AP58511 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMIM11AP58511 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMIM11AP58511 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM11AP58511 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM11AP58511 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms