Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PDE1AP54750 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDE1AP54750 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PDE1AP54750 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
PDE1AP54750 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PDE1AP54750 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 MESTP1-201ENST00000404287 994 ntBASIC23.36■■□□□ 1.33
PDE1AP54750 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.36■■□□□ 1.33
PDE1AP54750 FAM197Y1-201ENST00000421178 764 ntBASIC23.36■■□□□ 1.33
PDE1AP54750 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PDE1AP54750 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PDE1AP54750 AC026271.3-201ENST00000571884 352 ntBASIC23.36■■□□□ 1.33
PDE1AP54750 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.36■■□□□ 1.33
PDE1AP54750 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PDE1AP54750 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.36■■□□□ 1.33
PDE1AP54750 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PDE1AP54750 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE1AP54750 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.35■■□□□ 1.33
PDE1AP54750 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE1AP54750 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE1AP54750 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDE1AP54750 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE1AP54750 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.35■■□□□ 1.33
PDE1AP54750 RPS2P55-201ENST00000397318 883 ntBASIC23.35■■□□□ 1.33
PDE1AP54750 AC004951.3-201ENST00000418645 1148 ntBASIC23.35■■□□□ 1.33
PDE1AP54750 AC107956.1-201ENST00000494359 873 ntBASIC23.35■■□□□ 1.33
PDE1AP54750 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PDE1AP54750 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDE1AP54750 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDE1AP54750 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE1AP54750 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE1AP54750 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PDE1AP54750 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 AL135905.2-201ENST00000584934 1404 ntBASIC23.34■■□□□ 1.33
PDE1AP54750 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.34■■□□□ 1.33
PDE1AP54750 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
PDE1AP54750 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.34■■□□□ 1.33
PDE1AP54750 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.34■■□□□ 1.33
PDE1AP54750 CD177P1-201ENST00000606252 935 ntBASIC23.34■■□□□ 1.33
PDE1AP54750 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.34■■□□□ 1.33
PDE1AP54750 AC130371.2-201ENST00000619443 611 ntBASIC23.34■■□□□ 1.33
PDE1AP54750 TMEM191A-211ENST00000637163 1067 ntBASIC23.34■■□□□ 1.33
PDE1AP54750 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.34■■□□□ 1.33
PDE1AP54750 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE1AP54750 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.34■■□□□ 1.33
PDE1AP54750 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.33■■□□□ 1.33
PDE1AP54750 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE1AP54750 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.33■■□□□ 1.33
PDE1AP54750 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PDE1AP54750 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE1AP54750 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.33■■□□□ 1.33
PDE1AP54750 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDE1AP54750 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.33■■□□□ 1.33
PDE1AP54750 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.33■■□□□ 1.33
PDE1AP54750 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.33■■□□□ 1.33
PDE1AP54750 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.33■■□□□ 1.33
PDE1AP54750 AC233702.5-201ENST00000584107 538 ntBASIC23.33■■□□□ 1.33
PDE1AP54750 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.33■■□□□ 1.33
PDE1AP54750 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE1AP54750 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDE1AP54750 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDE1AP54750 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PDE1AP54750 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PDE1AP54750 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.33■■□□□ 1.32
PDE1AP54750 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PDE1AP54750 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 B3GAT3P1-201ENST00000471720 806 ntBASIC23.32■■□□□ 1.32
PDE1AP54750 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE1AP54750 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE1AP54750 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE1AP54750 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.32■■□□□ 1.32
PDE1AP54750 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
PDE1AP54750 Z99916.2-201ENST00000604037 246 ntBASIC23.32■■□□□ 1.32
PDE1AP54750 AC011298.2-201ENST00000617989 482 ntBASIC23.32■■□□□ 1.32
PDE1AP54750 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE1AP54750 AC113410.3-201ENST00000623366 203 ntBASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms